CDS

Accession Number TCMCG002C08103
gbkey CDS
Protein Id XP_020087776.1
Location join(479561..479848,480151..480231,481146..481217,482665..483420)
Gene LOC109709846
GeneID 109709846
Organism Ananas comosus

Protein

Length 398aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA371634
db_source XM_020232187.1
Definition pre-mRNA splicing factor SR-like 1 isoform X2 [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category S
Description PRP38 family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12850        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010226        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0071011        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGATACAAACCTCTGGGAGACCTATTGATACTTTGCTTGAGAAGGTGCTTTGCATGAACATCCTCTCTTCTGATTATTTTAAAGAGCTTTACAGATTGAAGACTTACCACGAAGTTATTGATGAGATTTACAATCAAGTCGATCATGTGGAGCCATGGATGACCGGCAACTGTAGAGGTCCTTCCACAGCATTTTGCCTTCTCTATAAATTCTTCACGATGAAGCTTACCGTCAAACAAATGCATGGTTTGTTGAAGCATTCGGATTCTCCATATATTAGAGCTATTGGCTTCCTGTATCTACGATATGTTGCCGATCCAAAGACATTATGGACTTGGTATGAGCCCTACATAAAAGATGATGAGGAGTTCTCTCCAGGATCTAACGGGAGAATGACAACCATGGGTGTGTATGTGCGTGACCTTCTGCTTGGACAGTATTACTTTGATACCCTTTTTCCGCGTGTGCCTGTGCCAGTCGTGCGCCAAATAGTTGCCAATCTCGAGAAGATGAAGCTTCCAACCAAGCACTCTGGGGTGACTGGAGAATCTAGTCGCCATGGCTCTGACGACACAGCTCGTCGCCCTCCTTCTGTGAAAGCTGCCTTATCTGTCTCTTTTGGTCAGCGGGCGCCACATCGTGCGTCCACTCGTGACTCTTCCCCTGTCCGTCGCGCACTGCCTCCCCCTCGTGAAAGATCATCCCCTAGTGACCGCCGGAGTCACAGTCTTGAAGGTCCCGATCGCCATCGCCGTGATCGAGATCGTGATGATCATCGCGAGAGGGACAGAGACAGGGACAGGGACAGGAGGCGTGAGCTTGATCGAAATGAGCGAGATAGCAGAGATAGGGACTACTATCGATCCAAGTATGAGAAAAGTGAGCGTGATTCTGATCGGTATAAACGCTCTAGTTCACGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGTAGAAGCAGGAGCGGAAGTAGGAGCGCACACGTACAGGGTTCAGCATCCGAACATCGCTCTAGCCCATTTAGAGATGCGAGCAAAGAGAAGGCAGCCGCAAGTGTCCCGAGCAACCTAGCAAAGTTGAAGGACTTGTACGGCGATGCAACTGATAAGAAGAGTGCCGAAAATGACGGCAGTCGACTGCACAGTGATTACGGAACCGAAGAGGTGATCCGATTGGGTGGTTCTACGTGGAGGTGA
Protein:  
MEIQTSGRPIDTLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHSDSPYIRAIGFLYLRYVADPKTLWTWYEPYIKDDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRVPVPVVRQIVANLEKMKLPTKHSGVTGESSRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRALPPPRERSSPSDRRSHSLEGPDRHRRDRDRDDHRERDRDRDRDRRRELDRNERDSRDRDYYRSKYEKSERDSDRYKRSSSRRSRSRSRSRSRSRSGSRSAHVQGSASEHRSSPFRDASKEKAAASVPSNLAKLKDLYGDATDKKSAENDGSRLHSDYGTEEVIRLGGSTWR